March 06, 2009
Seminar

Prof. Dr. Peter Saalfrank
Chair of Theoretical Chemistry, University of Potsdam
Quantum chemistry and biological applications

Franziska Witzel
Charité
Theoretical Analysis of the fallover effect of RuBisCo

Dr. Katrin Tirok
MPI for Molecular Plant Physiology
Kinetic model of photosynthetic electron transport

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February 20, 2009
Seminar

Prof. Dr. Andrei Lupas
Director, Department of Protein Evolution, Max-Planck-Institute for Developmental Biology, Tübingen
Evolution of folded proteins

Dr. Stephan Lorenzen
AG Herzel, Institute for Theoretical Biology, Humboldt-University of Berlin
Monte Carlo Refinement of Protein-Protein Docking Decoys

Florian Krull
AG Knapp, Institute of Chemistry and Biochemistry, Free-University of Berlin
Sampling and Scoring Geometries of Protein-Protein Complexes

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January 16, 2009
Seminar

Prof. Dr. Erich Wanker
Neuroproteomics group, Max Delbrück Centrum for molecular medicin (MDC) Berlin Buch
Modulating protein misfolding pathways in neurodegeneration

Carola Huthmacher
Computational Systems Biochemistry group, Charité Berlin
Modeling stage-specific metabolism of the malaria pathogen Plasmodium falciparum

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December 12, 2008
Seminar

Prof. Dr. Alexander Mikhailov
Fritz-Haber-Institute of Max-Planck-Gesellschaft, Berlin
Elastic network models of protein machines

Dr. Wolfram Liebermeister
Max Planck Institute for Molecular Genetics, Berlin
Methods for model construction and data integration in metabolic modeling

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November 07, 2008
Seminar

Anders Carlsson
Washington University St. Louis
Effects of Nonequilibrium Processes on Force Generation by Actin Polymerization

Nikolaus Rajewsky
Max-Delbrück Center for Molecular Medicine
No Title

July 11, 2008
Seminar

Prof. H. Levine
Physics Department, University of California San Diego
Eukaryotic Chemotaxis: How cells use nonlinear pde's to decide where to go

Prof. Bernd Walz
Inst. of Biochemistry and Biology, Department of Animal Physiology, University of Potsdam
Flies spit: a matter of interacting Calcium and cAMP signaling

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June 9-11, 2008
IBSB 08

May 9, 2008
Computational Biology Seminar

Martin Frith
AIST - Computational Biology Research Center, Tokyo

Marta Luksza
Computational Molecular Biology, Max-Planck-Institute for Molecular Genetics

April 17-20, 2008
Hiddensee Conference 08

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March 14, 2008
Database Workshop at Charité, Institute of Biochemistry

Prof. Dr. Ulf Leser
Knowledge Management in Bioinformatics, Humboldt University Berlin
Mining Phenotypes for Protein Function Prediction

Jan Küntzer
Center for Bioinformatics, Saarland University
The biological information system BN++

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February 15, 2008
Max Planck Institute for Molecular Plant Physiology
Systems Biology and Mathematical Modelling

Dr. Mark Poolman
Cell Systems Modelling Group, Oxford Brookes University, UK
Metabolic modelling and its application to plant metabolism

Nils Christian
Systems Biology and Mathematical Modelling Group, Max Planck Institute for Molecular Plant Physiology, Potsdam, Germany
Extension of draft metabolic networks

Dr. Wolfram Weckwerth
Integrative Proteomics and Metabolomics Group, Max Planck Institute for Molecular Plant Physiology, Potsdam, Germany
Integration and biological interpretation of metabolomic and proteomic phenotypes in plant systems biology

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January 11, 2008
Institute for Chemistry and Biochemistry
Computational Biology

Peter Serocka
CAS-MPG Partner Institute for Computational Biology, Shanghai, China
A Challenge in Topological Proteomics: Visualisation of 100-dimensional Image Data

Dr. Axel Mosig
CAS-MPG Partner Institute for Computational Biology, Shanghai, China
Max Planck Institute for Mathematics in the Sciences, Leipzig, Germany
Reading the Genome between the Lines: Homology Search based non-coding RNA gene finding

Dr. Stephan Lorenzen
FU-Berlin, Institute for Chemistry and Biochemistry
Predicting Protein-Protein Association

Aysam Gürler
FU-Berlin, Institute for Chemistry and Biochemistry
Flexible docking and alignment of small molecules

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December 14, 2007
Seminar at Institute of Molecular Biology and Bioinformatics
Structural Bioinformatics

PD Dr. Ulrike Alexiev
Structural Dynamics and Function of Biological Systems, Free University Berlin
Fast conformational switches in biological receptors

Raphael Bauer
Structural Bioinformatics Group, Charité
Superposition - problems and algorithms

Jessica Ahmed
Structural Bioinformatics Group, Charité
Cellular fingerprints - a novel concept for in silico screening and target prediction

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November 16, 2007
Seminar at Max-Planck-Institute for Systems Biology
Computational Systems Biology

Thomas Wilhelm
Theoretical Systems Biology, Institute of Food Research, Norwich Research Park
New approaches of pattern identification in biological data

Christian Waltermann
Computational Systems Group, Max-Planck-Institute
Study of gene expression regulation with the gTOW method

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October 19, 2007
Seminar at Charité, Institute of Biochemistry
Bioinformatics

Dr. Andreas Hoppe
Institue for Biochemistry, Charité
Thermodynamics Constraints Flux-balance Models

Areejit Samal
Department of Physics and Astrophysics, University of Delhi
System Level Properties Of The Metabolic Network And The Genetic Network That Regulates It

July 31 - August 2, 2007
Seventh Annual International Workshop on Bioinformatics and Systems Biology (IBSB) at Institute of Medical Science, University of Tokio

Canceled: July 17, 2007
Seminar at Charité, Institute of Biochemistry
Molecular Simulations

Prof. Klaus Schulten
University of Illinois, Theoretical and Computational Biophysics Group
Structural Systems Biology - Today and Tomorrow

Prof. Zan Luthey-Schulten
University of Illinois, Department of Chemistry
On the Evolution of Translation: Molecular Signatures of the Past

July 16, 2007
Seminar at Charité, Institute of Molecular Biology and Bioinformatics
Structural Bioinformatics

Prof. Sandor Vajda
Boston University, Structural Bioinformatics Laboratory
Overview about the partner faculty in Boston, Fragment-based drug design

Jessica Ahmed
Charité, Structural Bioinformatics Group
Development and biological evaluation of specific g-secretase inhibitors

Dr. Peter Hildebrand
Charité, Structural Bioinformatics Group
Ten most wanted: Ligand-based modelling of the g-secretase

June 5, 2007
Workshop
Time- and project Managment

Golin Science Managment, Hamburg

June 1, 2007
Seminar

Prof. Klaus Kroy
University of Leipzig, Institue of Theoretical Physics, Soft Condensed Matter Theory Group
Why is actin soft and why does it matter? Moves and muscles, cell motility

Azam Gholami
Hahn-Meitner-Institute Berlin, Department of Theoretical Physics
Velocity oscillations in actin based motility

April 20, 2007
Seminar Humboldt University, Institute for Biology
Systems Biology of Apoptosis

Dr. Markus Rehm
Royal College of Surgeons in Ireland, Dublin, Department of Physiology and Medical Physics
Single cell analysis and computational modeling of apoptotic signaling

Stefan Legewie
Humboldt University zu Berlin, Department of Biology
Bistability in Caspase Activation

April 1-4, 2007
Sixth Hiddensee Conference "Genomics and Systems Biology of Molecular Networks"

Hiddensee conference