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PhD Projects

See also: CSB Alumni, PhD Projects

See also: CSB Associates, PhD Projects

 

PhD Student

Supervisors

Project

Katinka Becker

1. Alexander Bockmayr (Freie Universität Berlin, Mathematics in Life Science, Institute for Mathematics); 2. Nils Blüthgen (Charité)

(07.2014-07.2017)

 Modeling of signaling pathways from perturbation data

Johannes Eckstein

1. Hermann-Georg Holzhütter (Charité - Universitätsmedizin Berlin, Computational Systems Biochemistry Group)

(09.2015-08.2017)

Mathematical modeling of biomembranes and their influences on cellular processes

Torsten Groß

1. Nils Blüthgen (Charité – Universitätsmedizin Berlin, Institute for Pathology); 2. Alexander Bockmayr (FU)

(07.2014-07.2017)

Interference of signal transduction pathways from phosphorylation data to identify targets of combinatorial cancer therapy

Asija Diag

1. Nikolaus Rajewsky (Max Delbrück Center for Molecular Medicine Berlin-Buch, Systems Biology of Gene Regulatory Elements); 2. Markus Landthaler (MDC)

(09.2015-08.2018)

A spatially resolved RNA map for the Caenorhabditis elegans germline

Ekaterina Eroshok

1. Uwe Ohler (Max Delbrück Center for Molecular Medicine Berlin-Buch, Computational Regulatory Genomics); 2. Markus Landthaler (MDC)

(10.2015-10.2018)

Upstream open reading frames and their role in translation regulation

Patrick Pett

1. Hanspeter Herzel (Humboldt-Universität zu Berlin, Theoretical Biology, Institute for Biology); 2. Nils Blüthgen (Charité)

(11.2015-10.2018)

Systems level generation, propagation and synchronization of circadian rhythmicity in the mouse liver and its connection to metabolism

Andrea Auconi

1. Edda Klipp (Humboldt-Universität Berlin, Institute for Biology, Theoretical Biophysics); 2. Alexander Bockmayr (FU)

(11.2015-11.2018)

Causal influence and information flows in small signaling pathways

Guoyu Wu

1. Zhike Zi (Max Planck Institute for Molecular Genetics, Cell Signaling Dynamics; 2. Edda Klipp
(HU, Theor Biophys)

(12.2015-11.2018)

Investigating TGF-β-regulated cell proliferation decisions in single cells

Julia Katharina Schlichting

1. Edda Klipp (Humboldt-Universität Berlin, Institute for Biology, Theoretical Biophysics); 2. Nils Blüthgen (Charité)

(01.2016-12.2018)

Mathematical modeling of the yeast cell cycle

Marjan Faizi

1. Ralf Steuer (Humboldt-Universität zu Berlin, Theoretical Biology, Institute for Biology); 2. Alexander Bockmayr (FU)

(02.2016-02.2019)

Cellular trade-offs and resource allocation in phototrophic metabolism

Zeba Sultana

1. Edda Schulz (Max Planck Institute for Molecular Genetics, Regulatory Networks in Stem Cells); 2. Nils Blüthgen (Charité)

(04.2016-03.2019)

Modeling the impact of double X-dosage on signaling pathways implicated in pluripotency

Orsalia Hazapis

1. Markus Landthaler (Max Delbrück Center for Molecular Medicine Berlin-Buch, Genomcentrum); 1. Uwe Ohler (MDC)

(05.2016-05.2019)

Identifying the role and function of ribonucleoprotein complexes: a bioinformatic analysis for understanding and categorizing the function of RNPs

Lam-Ha Ly

1. Martin Vingron (Max Planck Institute for Molecular Genetics, Computational Molecular Biology)

(10.2016-10.2019)

Statistical analysis of single-cell RNA-seq data

Mareike Simon

1. Jana Wolf (Max Delbrück Center for Molecular Medicine Berlin-Buch)

(01.2017-12.2019)

Integrated analysis of metabolic and signaling processing in tumor cells

Daniel Schwabe

1. Martin Falcke (Max Delbrück Center for Molecular Medicine Berlin-Buch)

(02.2017-01.2020)

Quantification and non-genetic origins of cell-to-cell variability

 

News

Next CSB seminar

December 07, 2017 with
Jana Wolf (MDC Berlin)

 

 

 

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