[Legend: boldface – (former) lab members; #shared first authorship; *shared senior authorship]<\/p>\n\n\n\n
Neubauer A, Ruaud S, Waller S, Frangedakis E, Li F-W, N\u00f6tzold SI,\u00a0Wicke S,<\/strong> Bailly S, Sz\u00f6v\u00e9nyi P. Step\u2010by\u2010step protocol for the isolation and transient transformation of hornwort protoplasts.<\/a>\u00a0Applications in Plant Sciences<\/em>. doi: 10.1002\/aps3.11456.<\/p>\n\n\n\n Bellis ES, von M\u00fcnchow CS, Odero CO, Kronberger A, Kelly E, Xia T, Huang X,\u00a0Wicke S,\u00a0<\/strong>\u00a0Runo SM, dePamphilis CW,\u00a0\u00a0Lasky JR. Genomic signatures of host-specific selection in a parasitic plant.<\/a> bioRXiv. doi: https:\/\/doi.org\/10.1101\/2022.02.01.478712<\/p>\n\n\n\n Lyko P<\/strong>, Wicke S<\/strong>. Genomic reconfiguration in parasitic plants involves considerable gene losses alongside global genome size inflation and gene births.<\/a>\u00a0Plant Physiology<\/em>\u00a0186 (3): 1412\u20131423<\/p>\n\n\n\n Dayou O<\/strong>, Kibet W, Ojola P, Gangashetty PI,\u00a0Wicke S<\/strong>, Runo S. Two-tier witchweed (Striga hermonthica<\/em>) resistance in wild pearl millet (Pennisetum glaucum<\/em>) 29Aw.<\/a>\u00a0Weed Science<\/em>. 69 (3): 300\u2013306. Doi: 10.1017\/wsc.2021.12<\/p>\n\n\n\n K\u00f6sters LM<\/strong>, Wiechers S, Lyko P<\/strong>, M\u00fcller KF,\u00a0Wicke S.<\/strong>\u00a0WARPP\u00a0<\/em>\u2013 Web Application for the Research of Parasitic Plants.\u00a0Plant Physiology<\/em>.<\/a> 185(4): 1374\u2013138.\u00a0<\/p>\n\n\n\n de Saint Germain A, Jacobs A, Brun G<\/strong>, Pouvreau J-B, Braem L, Cornu D, Clav\u00e9 G, Baudu E, Steinmetz V, Servajean V,\u00a0Wicke S<\/strong>, Gevaert K, Simier P, Goormachtig S, Delavault P, Boyer F-D, 2020. A\u00a0Phelipanche ramosa<\/em>\u00a0KAI2 protein perceives enzymatically strigolactones and isothiocyanates.<\/a>\u00a0Plant Communications<\/em>. doi:\u00a0<\/strong>10.1016\/j.xplc.2021.100166<\/p>\n\n\n\n Baker WJ, Dodsworth S, Forest F, Graham SW, Johnson MG, McDonnell A, Pokorny L, Tate J,\u00a0Wicke S<\/strong>, Wickett NJ. Exploring Angiosperms353: an open, community toolkit for collaborative phylogenomic research on flowering plants.<\/a>\u00a0American Journal of Botany<\/em>\u00a0108 (7): 1059\u20131065.\u00a0Editorial<\/em><\/p>\n\n\n\n McDonnell AJ, Baker WJ, Dodsworth S, Forest F, Graham SW, Johnson MG, Pokorny L, Tate J,\u00a0Wicke S<\/strong>, Wickett NJ.\u00a0<\/em>Exploring Angiosperms353: Developing and applying a universal toolkit for flowering plant phylogenomics.<\/a>\u00a0Applications in Plant Sciences\u00a0<\/em>9 (7): e11443,\u00a0Editorial<\/em><\/p>\n\n\n\n Scharsack J, Wieczorek B, Schmidt-Drewello A, Buescher J, Franke F, Moore A, Branca A, Witten A, Stoll M, Bornberg-Bauer E,\u00a0Wicke S,<\/strong>\u00a0Kurtz J. Climate change facilitates a parasite\u2019s host exploitation via temperature-mediated immunometabolic processes.<\/a>\u00a0Global Change Biology<\/em>. 27(1):94\u2013107.\u00a0<\/p>\n\n\n\n \u00a0Jin D-J,\u00a0Wicke S<\/strong>, Gan L, Yang J-B, Jin J-J, Yi T-S. The loss of the inverted repeat in the putranjivoid\u00a0review<\/em>\u00a0clade of Malpighiales.<\/a>\u00a0Frontiers in Plant Science<\/em>\u00a011:942<\/p>\n\n\n\n Li F-W, Nishiyama T, Waller M, Frangedakis E, Keller J, Li Z, Fernandez-Pozo N, Barker MS, Bennett T, Bl\u00e1zquez MA, Cheng S, Cuming AC, de Vries J, de Vries S, Delaux P-M, Diop IS, Harrison J, Hauser D, Hern\u00e1ndez-Garc\u00eda J, Kirbis A, Meeks JC, Monte I, Mutte SK, Neubauer A, Quandt D, Robison T, Shimamura M, Rensing SA, Villarreal JC,\u00a0Wicke S<\/strong>, Weijers D, Wong GK-S, and Sakakibara K, Sz\u00f6v\u00e9nyi P.\u00a0Anthoceros\u00a0<\/em>genomes illuminate the origin of land plants and the unique biology of hornworts.<\/a>\u00a0Nature Plants\u00a0<\/em>6(3):259\u2013272\u00a0[authors partly in alphabetical order]<\/p>\n\n\n\n Chen X#<\/sup>, Fang D#<\/sup>, Wu C, Liu B, Liu Y, [18 authors],\u00a0Wicke S*<\/strong>, Liu H*<\/em>. Comparative plastome analysis of root- and stem-feeding parasites of Santalales untangle the footprints of feeding mode and lifestyle transitions.<\/a>\u00a0Genome Biology and Evolution<\/em>. 12(1):3663\u20133676<\/p>\n\n\n\n Charoenwattanasatien R#<\/sup>, Zinzius K#<\/sup>, Scholz M,\u00a0Wicke S,<\/strong> Tanaka H, Brandenburg JS, Ikegami T, Matsumoto T, Oda T, Sato M, Hippler M*, Kurisu G*. Calcium sensing via EF-hand 4 enables thioredoxin activity in the sensor-responder protein calredoxin in the green alga\u00a0Chlamydomonas reinhardtii<\/em>.<\/a>\u00a0Journal of Biological Chemistry<\/em>. 295(1):170\u2013180<\/p>\n\n\n\n 2019\u00a0<\/span><\/strong>\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0\u00a0<\/p>\n\n\n\n Qu X-J, Jun-Bo Yang JB,\u00a0Wicke S*,<\/strong> Yi T-S*. Plastome reduction in the parasitic gymnosperm\u00a0Parasitaxus<\/em>\u00a0is due to losses of only photosynthesis but not housekeeping genes and involved the secondary gain of a large inverted repeat.<\/a>\u00a0Genome Biology and Evolution<\/em>\u00a011:2789\u20132796<\/p>\n\n\n\n Aly R, Lati R, Abu-Nassar J, Ziadna H, von Muenchow CS<\/strong>,\u00a0Wicke S<\/strong>, Bari VK, Eizenberg H. The weedy parasite\u00a0Phelipanche aegyptiaca<\/em>\u00a0attacks\u00a0Brassica rapa<\/em>\u00a0var.\u00a0rapa<\/em>\u00a0L. for the first time in Israel.<\/a>\u00a0Plant Disease<\/em>. Doi: 10.1094\/PDIS-02-19-0285-PDN<\/p>\n\n\n\n Maul K, Krug M, Nickrent DL, M\u00fcller KF, Quandt D,\u00a0Wicke S<\/strong>. Morphology, geographic distribution, and host preferences are poor predictors of phylogenetic relatedness in the mistletoe genus\u00a0Viscum<\/em>\u00a0L<\/a>.\u00a0Molecular Phylogenetics and Evolution<\/em>\u00a0131:106\u2013115.<\/p>\n\n\n\n Wicke S<\/strong>, Naumann J. Molecular evolution of plastid genomes in parasitic plants.<\/a>\u00a0In<\/em>: Advances in Botanical Research \u2013 Plastid genome evolution. Chaw S-M, Jansen RK (eds.). Elsevier London. Pp. 315\u2013347<\/p>\n\n\n\n Barrett C,\u00a0Wicke S<\/strong>, Sass C. Dense infraspecific sampling reveals rapid and independent trajectories of plastome degradation in a heterotrophic orchid complex.<\/a>\u00a0New Phytologist<\/em>\u00a0218: 1192\u20131204<\/p>\n\n\n\n Wang Y-H,\u00a0Wicke S<\/strong>, Wang H, Jin J-J, Zhang S-D, Li D-Z, Yi T-S. Plastid genome evolution in the early-diverging legume subfamily Cercidoideae (Fabaceae)<\/a>.\u00a0Frontiers in Plant Science<\/em>\u00a08: 138<\/p>\n\n\n\n Levy Karin E, Ashkenazy H,\u00a0Wicke S<\/strong>, Pupko T, Mayrose I. TraitRateProp: A web server for the detection of trait-dependent evolutionary rate shifts in sequence sites.<\/a>\u00a0Nucleic Acids Research<\/em>\u00a045: W260\u2013W264<\/p>\n\n\n\n Levy Karin E,\u00a0Wicke S<\/strong>, Pupko T, Mayrose I. An integrated model of phenotypic trait changes and site-specific sequence evolution.<\/a>\u00a0Systematic Biology<\/em>\u00a066: 917\u2013933<\/p>\n\n\n\n Noben S, Kessler M, Quandt D, Weigand A,\u00a0Wicke S<\/strong>, Krug M, Lehnert M. Biogeography of the Gondwanan tree fern family Dicksoniaceae \u2013 a tale of vicariance, dispersal, and extinction.<\/a>\u00a0Journal of Biogeography<\/em>\u00a044: 2648\u20132659<\/p>\n\n\n\n Wicke S<\/strong>, M\u00fcller KF, dePamphilis CW, Quandt D, Bellot S, Schneeweiss GM. Mechanistic model of evolutionary rate variation en route to a nonphotosynthetic lifestyle in plants.<\/a>\u00a0Proceedings of the National Academy of Sciences of the United States of America\u00a0<\/em>113: 9045\u20139050.\u00a0Cover Article<\/em><\/strong><\/p>\n\n\n\n Feng Y#<\/sup><\/strong>,\u00a0Wicke S#<\/sup><\/strong>, Zhou T-T, Ma X, Lin C-S, Li J-W, Li D-Z, Huang W-C, Huang L-Q, Jin X. Multiple independent reductions of plastid genomes in an orchid tribe with autotrophic and heterotrophic species.<\/a>\u00a0Genome Biology and Evolution<\/em>\u00a08: 2164\u20132175<\/p>\n\n\n\n R\u00f6schenbleck J#<\/sup>,\u00a0Wicke S<\/strong>#<\/sup>, Weinl S, Kudla J, M\u00fcller KF. Genus-wide screening reveals four distinct types of structural plastid genome organization in\u00a0Pelargonium<\/em>\u00a0(Geraniaceae).<\/a>\u00a0Genome Biology and Evolution<\/em>9: 64\u201376<\/p>\n\n\n\n Cusimano N,\u00a0Wicke S<\/strong>. Massive intracellular gene transfer during plastid genome reduction in nongreen Orobanchaceae.<\/a>\u00a0New Phytologist<\/em>\u00a0210: 680\u2013693<\/p>\n\n\n\n Wicke S<\/strong>, Schneeweiss GM. Next generation organellar genomics: Potentials and\u00a0pitfalls of high-throughput technologies for molecular evolutionary studies and plant systematics.<\/a>\u00a0In<\/em>: Regnum Vegetabile \u2013 Next generation sequencing in plant systematics. H\u00f6randl E, Appelhans M (eds.). Koeltz Scientific Books Oberreifenberg, Pp. 9\u201350<\/p>\n\n\n\n Sz\u00f6v\u00e9nyi P, Frangedakis E, Ricca M, Quandt D,\u00a0Wicke S<\/strong>, Langdale JA. Establishment of\u00a0Anthoceros agrestis<\/em>\u00a0as a model species for studying the biology of hornworts.<\/a>\u00a0BMC Plant Biology<\/em>\u00a015: 98<\/p>\n\n\n\n Wicke S<\/strong>, Sch\u00e4ferhoff B, dePamphilis CW, M\u00fcller KF. Disproportional plastome-wide increase of substitution rates and relaxed purifying selection in genes of carnivorous Lentibulariaceae.<\/a>\u00a0Molecular Biology and Evolution<\/em>\u00a031: 529\u2013545<\/p>\n\n\n\n Wicke S<\/strong>, M\u00fcller KF, dePamphilis CW, Quandt D, Wickett NJ, Zhang Y, Renner SS, Schneeweiss GM. Mechanisms of functional and physical genome reduction in photosynthetic and nonphotosynthetic parasitic plants of the broomrape family.\u00a0<\/a>The Plant Cell<\/em>\u00a025: 3711\u20133725.\u00a0Large-Scale Biology Article with Editorial Commentary<\/em><\/strong><\/p>\n\n\n\n Wicke S<\/strong>. Genomic evolution in Orobanchaceae.\u00a0In<\/em>: Parasitic Orobanchaceae \u2013 Parasitic Mechanisms and Control Strategies.<\/a> Joel DM, et al. (eds.). Springer Berlin, Pp. 267\u2013286<\/p>\n\n\n\n Damayanti L, Mu\u00f1oz J,\u00a0Wicke S<\/strong>, Symmank L, Shaw B, Frahm J-P, Quandt D. Common but new:\u00a0Bartramia rosamrosiae<\/em>, a ‘new’ widespread species of apple mosses (Bartramiales, Bryophytina) from the Mediterranean and western North America.<\/a>\u00a0Phytotaxa<\/em>\u00a073: 37\u201359<\/p>\n\n\n\n Wicke S<\/strong>, Schneeweiss GM, M\u00fcller KM, dePamphilis CW, Quandt D. Evolution of the plastid chromosome in land plants: gene content, gene order, gene function.<\/a>\u00a0Plant Molecular Biology<\/em>\u00a076: 273\u2013297.\u00a0Cover Article<\/em><\/strong><\/p>\n\n\n\n Wicke S<\/strong>, Costa A, Mu\u00f1oz J, Quandt D. Restless 5S \u2013 The re-arrange-ment(s) and evolution of the nuclear ribosomal DNA in land plants.<\/a>\u00a0Molecular Phylogenetics and Evolution<\/em>\u00a061: 321\u2013332<\/p>\n\n\n\n Preu\u00dfing M, Olsson S, Sch\u00e4fer-Verwimp A, Wickett NJ,\u00a0Wicke S<\/strong>, Quandt D, Nebel M. New insights into the evolution of the liverwort family Aneuraceae (Metzgeriales, Marchantiophyta), with emphasis on the genus\u00a0Lobatiriccardia<\/em>.<\/a>\u00a0Taxon\u00a0<\/em>59: 1424\u20131440<\/p>\n\n\n\n
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